The detailed information of tRNA gene sequence


Sequence ID>SRA1016184
Genome IDSRR023846.385492
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 140
End posion on genome 54
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctcctgagtc
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCACTAGCTTCAGGTGCTAGCGGGGGCAACTTCGTG
GAGGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
cgactcacgg
Secondary structure (Cloverleaf model)
>SRA1016184	Leu	CAG
                   c      ACCA cgactcacgg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGGGGCAACTTCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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