The detailed information of tRNA gene sequence


Sequence ID>SRA1016195
Genome IDSRR023846.394182
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 116
End posion on genome 41
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agagtaccag
tRNA gene sequence 
GCCGCTTTAGCTCAGCTGGTAGAGCATCGCATTCGTAATGCGGGGGTCACAGGTTCGAGT
CCTGTAAGCGGCACCA
Downstream region at tRNA end position 
ctctccttag
Secondary structure (Cloverleaf model)
>SRA1016195	Thr	CGT
                   g      ACCA ctctccttag
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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