The detailed information of tRNA gene sequence


Sequence ID>SRA1016213
Genome IDSRR023846.405192
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 61
End posion on genome 148
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccggccaccg
tRNA gene sequence 
GGAGGGCTGTCCGAGCGGCCGATGGAGCTTGTCTTGAAAACAAGTGGGCAGAGATGTCTC
GTGGGTTCGAATCCCACGCCCTCCGCCG
Downstream region at tRNA end position 
gtcgggtcgc
Secondary structure (Cloverleaf model)
>SRA1016213	Ser	TGA
                   g      GCCG gtcgggtcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    C       T G G A
      C G A        G     TGGGCAGAGATGTCTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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