The detailed information of tRNA gene sequence


Sequence ID>SRA1016216
Genome IDSRR023846.405930
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 178
End posion on genome 92
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgacagccg
tRNA gene sequence 
GGACGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTAGGGGCAACTCTA
CCGTGGGTTCGAATCCCACCCCGTCCGggc
Downstream region at tRNA end position 
tgttctccga
Secondary structure (Cloverleaf model)
>SRA1016216	Ser	TGA
                   g      Gggc tgttctccga
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTAGGGGCAACTCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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