The detailed information of tRNA gene sequence


Sequence ID>SRA1016218
Genome IDSRR023846.406364
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 259
End posion on genome 183
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgcaaatac
tRNA gene sequence 
GGCCCCATCGTATAGCGGCCTAGTACGTCGCCCTCTCACGGCGGTAACACGGGTTCGAAT
CCCGTTGGGGGTCACC
Downstream region at tRNA end position 
Agcaccgaca
Secondary structure (Cloverleaf model)
>SRA1016218	Glu	CTC
                   c      CACC Agcaccgaca
                     G + T
                     G   G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T A T G       A C G G G     C
    G       + | | |                 T T
    C       G T A C
      C T A        G     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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