The detailed information of tRNA gene sequence


Sequence ID>SRA1016219
Genome IDSRR023846.406697
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 45
End posion on genome 118
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caatataaaa
tRNA gene sequence 
GGGGACATCGTATAGTTTGGTTAGTATACTTCTGTTGCATAGAAGAAACGCGAGTTCGAG
TCTCGCTGTCTCCAaga
Downstream region at tRNA end position 
tggttttgag
Secondary structure (Cloverleaf model)
>SRA1016219	Ala	TGC
                   a      Aaga tggttttgag
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     A - T          T G
                    T     C G C T C     A
    T T G A        C      | | | | |     G
  T         T A T G       G C G A G     C
  G         + | | +                 T T
  G         G T A T
    T T A          A     AAAC
                    C - G
                    T - A
                    T - A
                    C - G
                    T - A
                  G       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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