The detailed information of tRNA gene sequence


Sequence ID>SRA1016223
Genome IDSRR023846.408568
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctgcgcgat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
tgcattttgc
Secondary structure (Cloverleaf model)
>SRA1016223	Ala	TGC
                   t      ACCA tgcattttgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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