The detailed information of tRNA gene sequence


Sequence ID>SRA1016225
Genome IDSRR023846.408862
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 116
End posion on genome 200
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
cgtccgctcg
tRNA gene sequence
GCGGGCGTGGCGGAACTGGTAGACGCGCTGGATTTAGGTTCCAGTATCGAAAGATGTGGG
GGTTCGACTCCCTTCGCCCGCACCA
Downstream region at tRNA end position
gtgacgccgc
Secondary structure (Cloverleaf model)
>SRA1016225	Leu	TAG
                   g      ACCA gtgacgccgc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T T C C C     A
      C A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCGAAAGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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