The detailed information of tRNA gene sequence


Sequence ID>SRA1016228
Genome IDSRR023846.409399
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 152
End posion on genome 77
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctccggcgtt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCGGTTCGATC
CCGATTGGCTCCACCA
Downstream region at tRNA end position 
gatcaggcct
Secondary structure (Cloverleaf model)
>SRA1016228	Ala	GGC
                   t      ACCA gatcaggcct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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