The detailed information of tRNA gene sequence


Sequence ID>SRA1016235
Genome IDSRR023846.412082
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 181
End posion on genome 106
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctggcgcat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
ccccgaacga
Secondary structure (Cloverleaf model)
>SRA1016235	Ala	TGC
                   t      ACCA ccccgaacga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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