The detailed information of tRNA gene sequence


Sequence ID>SRA1016242
Genome IDSRR023846.416479
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 211
End posion on genome 137
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaccaccac
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCATCag
Downstream region at tRNA end position 
attctcagaa
Secondary structure (Cloverleaf model)
>SRA1016242	Met	CAT
                   c      TCag attctcagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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