The detailed information of tRNA gene sequence


Sequence ID>SRA1016243
Genome IDSRR023846.416878
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 275
End posion on genome 200
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
nnnnnnnntg
tRNA gene sequence
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCATCGGTTCGATC
CCGTTTACCTCCACCA
Downstream region at tRNA end position
ctcgttagat
Secondary structure (Cloverleaf model)
>SRA1016243	Ala	GGC
                   g      ACCA ctcgttagat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          C T
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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