The detailed information of tRNA gene sequence


Sequence ID>SRA1016244
Genome IDSRR023846.416878
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 162
End posion on genome 87
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaaggtttt
tRNA gene sequence 
GACTCTATCGTCTAGAGGCCTAGGACACCACCCTTTCACGGTGGTTACCGGGGTTCGAAT
CCCCGTAGAGTCGCCA
Downstream region at tRNA end position 
agtttgtggc
Secondary structure (Cloverleaf model)
>SRA1016244	Glu	TTC
                   t      GCCA agtttgtggc
                     G - C
                     A - T
                     C - G
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TTAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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