The detailed information of tRNA gene sequence


Sequence ID>SRA1016249
Genome IDSRR023846.418097
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 133
End posion on genome 208
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
accccggaac
tRNA gene sequence 
GGGGCTGTAGCTCAGATGGGAGAGCGCCGCAATCGCACTGCGGAGGTCAGCGGTTCGATC
CCGCTCAGCTCCACCA
Downstream region at tRNA end position 
ggtttcttcc
Secondary structure (Cloverleaf model)
>SRA1016249	Ala	CGC
                   c      ACCA ggtttcttcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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