The detailed information of tRNA gene sequence


Sequence ID>SRA1016276
Genome IDSRR023846.431452
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 235
End posion on genome 149
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gctcctcgtc
tRNA gene sequence 
GCCCAGATGGCGGAATTGGTAGACGCGCCAGCTTCAGGTGCTGGTACTCGAAAGGGTGTG
GAGGTTCGAGTCCTCTTCTGGGCACCA
Downstream region at tRNA end position 
ttccattttt
Secondary structure (Cloverleaf model)
>SRA1016276	Leu	CAG
                   c      ACCA ttccattttt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TACTCGAAAGGGTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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