The detailed information of tRNA gene sequence


Sequence ID>SRA1016288
Genome IDSRR023846.437280
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 130
End posion on genome 57
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
accgccgctc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCTTTTGCTTCCCAAGCAAGTGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
tcgcaaacag
Secondary structure (Cloverleaf model)
>SRA1016288	Gly	CCC
                   c      TCCA tcgcaaacag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     TGAC
                    T + G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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