The detailed information of tRNA gene sequence


Sequence ID>SRA1016289
Genome IDSRR023846.437497
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 227
End posion on genome 151
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aagcctcgat
tRNA gene sequence 
GCCCCCGTAGCTCAGCCGGATAGAGCGACGGTTTCCTAAACCGTAGGCCGCGTGTTCAAA
TCTCGCCGGGGGCACCA
Downstream region at tRNA end position 
gctttcacga
Secondary structure (Cloverleaf model)
>SRA1016289	Arg	CCT
                   t      ACCA gctttcacga
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | | |   |     A
    C       C T C G       G C G T G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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