The detailed information of tRNA gene sequence


Sequence ID>SRA1016290
Genome IDSRR023846.437828
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 11
End posion on genome 86
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccatcgtcgg
tRNA gene sequence 
GCCGCTTTAGCTCAGCTGGTAGAGCATCGCATTCGTAATGCGGGGGTCACAGGTTCGAGT
CCTGTAAGCGGCACCA
Downstream region at tRNA end position 
aattccagat
Secondary structure (Cloverleaf model)
>SRA1016290	Thr	CGT
                   g      ACCA aattccagat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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