The detailed information of tRNA gene sequence


Sequence ID>SRA1016304
Genome IDSRR023846.442314
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 146
End posion on genome 70
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggccgagccc
tRNA gene sequence 
GCCGCCTTGGCGCAGTCCGGTAGCGCAGTGCTCTTGTAAAGCGAAGGTCGTCGGTTCGAA
TCCGACAGGCGGCTCCC
Downstream region at tRNA end position 
ccggccccgt
Secondary structure (Cloverleaf model)
>SRA1016304	Thr	TGT
                   c      TCCC ccggccccgt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    C       C G C G       G T C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    G   A
                    T + G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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