The detailed information of tRNA gene sequence


Sequence ID>SRA1016315
Genome IDSRR023846.446157
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 237
End posion on genome 161
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtgcgtgcac
tRNA gene sequence 
GGGCCTATAGCTCAGACGGTTAGAGCGCTTCCCTGATAAGGAAGAGGTCAGAGGTTCAAG
TCCTCTTAGGCCCACCC
Downstream region at tRNA end position 
acggtccccg
Secondary structure (Cloverleaf model)
>SRA1016315	Ile	GAT
                   c      ACCC acggtccccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T C T C C     A
      A G A        A      | | | | |     A
    C       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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