The detailed information of tRNA gene sequence


Sequence ID>SRA1016316
Genome IDSRR023846.446385
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 91
End posion on genome 11
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
tctatcatta
tRNA gene sequence 
GGCGTTGTAGCAAAGTGGTTAATGCGATTGACTAGAAATCAATTCCCTTCGGGGGCGTAG
GTTCGAGTCCTGCCAACGTCGata
Downstream region at tRNA end position 
tatttttnnn
Secondary structure (Cloverleaf model)
>SRA1016316	Ser	AGA
                   a      Gata tatttttnnn
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | + | | |     G
    G       A A C G       G T A G G     C
    G         | | |                 T T
    T       A T G C
      T A          G     TCCCTTCGGGGGC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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