The detailed information of tRNA gene sequence


Sequence ID>SRA1016317
Genome IDSRR023846.446451
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 253
End posion on genome 178
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGACGCATAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCTTGGTTCGAGC
CCAAGTGCGTCCACCA
Downstream region at tRNA end position 
cctccaccgc
Secondary structure (Cloverleaf model)
>SRA1016317	Lys	CTT
                   c      ACCA cctccaccgc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          C G
                    T     G A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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