The detailed information of tRNA gene sequence


Sequence ID>SRA1016320
Genome IDSRR023846.447134
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 89
End posion on genome 166
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cccctccagt
tRNA gene sequence 
GCACCCATAGCTCAGCTGGATAGAGCATCAGACTACGAATCTGGAGGGTCGGGCGTTCGA
ATCGCTCTGGGTGCACCA
Downstream region at tRNA end position 
ggatttcctg
Secondary structure (Cloverleaf model)
>SRA1016320	Arg	ACG
                   t      ACCA ggatttcctg
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C G C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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