The detailed information of tRNA gene sequence


Sequence ID>SRA1016339
Genome IDSRR023846.458635
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 179
End posion on genome 254
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gtcgcgcatg
tRNA gene sequence 
GTGGGTATAGCTCAGCTGGTAGAGCGCCTGGTTGTGGTCTAGGAGGCCGCGGGTTCAAGC
CCCGTTACTCACCCCA
Downstream region at tRNA end position 
atggaaaggn
Secondary structure (Cloverleaf model)
>SRA1016339	His	GTG
                   g      CCCA atggaaaggn
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T          C G
                    T     T G C C C     A
      C G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G + T
                    G - C
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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