The detailed information of tRNA gene sequence


Sequence ID>SRA1016370
Genome IDSRR023846.469303
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 196
End posion on genome 270
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
caacaccccc
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTTAGAGCGCTACCTTGACATGGTAGAGGTCGCCGGTTCGAA
TCCGGCATTGCCCACtg
Downstream region at tRNA end position 
ccgatgccct
Secondary structure (Cloverleaf model)
>SRA1016370	Val	GAC
                   c      ACtg ccgatgccct
                     G - C
                     G - C
                     G - C
                     G   G
                     A - T
                     A - T
                     T - A          T A
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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