The detailed information of tRNA gene sequence


Sequence ID>SRA1016377
Genome IDSRR023846.470866
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 155
End posion on genome 241
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgggcccagt
tRNA gene sequence 
GCCGCCGTGGCGAAATTGGCAGACGCACCCGACTCCAAATCGGGCATCTTCACGGGTTTG
AGGGTTCGAGTCCCTCCGGCGGCACCA
Downstream region at tRNA end position 
tcggaactcc
Secondary structure (Cloverleaf model)
>SRA1016377	Trp	CCA
                   t      ACCA tcggaactcc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CATCTTCACGGGTTT
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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