The detailed information of tRNA gene sequence


Sequence ID>SRA1016381
Genome IDSRR023846.472863
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 151
End posion on genome 227
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cttggcgagt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCAGTGGTTCGAA
TCCACTCAGGCCCACCA
Downstream region at tRNA end position 
tttgccagtt
Secondary structure (Cloverleaf model)
>SRA1016381	Ile	GAT
                   t      ACCA tttgccagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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