The detailed information of tRNA gene sequence


Sequence ID>SRA1016400
Genome IDSRR023846.479835
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 190
End posion on genome 264
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggtcggcaaT
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCGGTTCGATC
CCGATTGGCTCCAGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016400	Ala	GGC
                   T      AGnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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