The detailed information of tRNA gene sequence


Sequence ID>SRA1016421
Genome IDSRR023846.489057
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 84
End posion on genome 159
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tgtctctcag
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAGTGTTCGAGT
CACTCAGGGCCCACCA
Downstream region at tRNA end position 
ccaacatcgc
Secondary structure (Cloverleaf model)
>SRA1016421	Lys	CTT
                   g      ACCA ccaacatcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C T C A C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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