The detailed information of tRNA gene sequence


Sequence ID>SRA1016429
Genome IDSRR023846.492870
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 15
End posion on genome 91
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caccggcctt
tRNA gene sequence 
CGGAGTGTAGCGCAGTCTGGTAGCGCACCACGTTCGGGACGTGGGGGTCGCAGGTTCAAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position 
agtttcccta
Secondary structure (Cloverleaf model)
>SRA1016429	Pro	CGG
                   t      ACCA agtttcccta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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