The detailed information of tRNA gene sequence


Sequence ID>SRA1016430
Genome IDSRR023846.493481
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 96
End posion on genome 171
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcgctggccT
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGCGCACCGTTCGGGTCGGTGAGGTCCCCGGTTCAAA
TCCGGGCGCCCCCGAta
Downstream region at tRNA end position 
ttcgctcgcg
Secondary structure (Cloverleaf model)
>SRA1016430	Pro	CGG
                   T      GAta ttcgctcgcg
                     C   C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     A
    C       C G C G       C C C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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