The detailed information of tRNA gene sequence


Sequence ID>SRA1016436
Genome IDSRR023846.496336
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 148
End posion on genome 62
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
acctgcactc
tRNA gene sequence 
GCGCGAGTGGCGGAATAGGCAGACGCGCACGGTTCAGGTCCGTGTGCCCGAAAGGGTGTG
GGGGTTCAACTCCCCCCTCGCGCACCG
Downstream region at tRNA end position 
atccatgcag
Secondary structure (Cloverleaf model)
>SRA1016436	Leu	CAG
                   c      ACCG atccatgcag
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T C
                    T     C C C C C     A
      T A A        G      | | | | |     A
    A       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGCCCGAAAGGGTGT
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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