The detailed information of tRNA gene sequence


Sequence ID>SRA1016449
Genome IDSRR023846.503401
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 161
End posion on genome 237
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gcggcgcatc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGCGGTTCGAGC
CCGTCACCCGCCCACC
Downstream region at tRNA end position 
Agacacctgt
Secondary structure (Cloverleaf model)
>SRA1016449	Val	TAC
                   c      CACC Agacacctgt
                     G - C
                     G - C
                     G   G
                     C   C
                     G - C
                     G - C
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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