The detailed information of tRNA gene sequence


Sequence ID>SRA1016450
Genome IDSRR023846.503516
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 240
End posion on genome 164
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcacggttc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAA
TCTACCCGGGCCCACCA
Downstream region at tRNA end position 
atctcggcct
Secondary structure (Cloverleaf model)
>SRA1016450	Ile	GAT
                   c      ACCA atctcggcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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