The detailed information of tRNA gene sequence


Sequence ID>SRA1016457
Genome IDSRR023846.507950
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 300
End posion on genome 225
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaatttatT
tRNA gene sequence 
GGAAAAGTAGCTCAGTTGGTTAGAGTAATAGCTTGTCACGTTATATGTCGCGGGTTCAAA
TCCCGTTTTTTCCGTta
Downstream region at tRNA end position 
attttattta
Secondary structure (Cloverleaf model)
>SRA1016457	Asp	GTC
                   T      GTta attttattta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G + T          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     ATGTC
                    A - T
                    T - A
                    A - T
                    G + T
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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