The detailed information of tRNA gene sequence


Sequence ID>SRA1016459
Genome IDSRR023846.508664
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 245
End posion on genome 170
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggtgttga
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGTAAGTTCGAGC
CTTACTGCCCCTGCCA
Downstream region at tRNA end position 
ttcctcacca
Secondary structure (Cloverleaf model)
>SRA1016459	Trp	CCA
                   a      GCCA ttcctcacca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     C A T T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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