The detailed information of tRNA gene sequence


Sequence ID>SRA1016461
Genome IDSRR023846.511042
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 38
End posion on genome 113
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
caaaagtacc
tRNA gene sequence 
GATTCTGTAGCTCAGCTGGTAGAGCAGTACACTTTTAATGTACGGGTCCTGGGTTCGAAT
CCCAGCGGAATCACTA
Downstream region at tRNA end position 
aaaaacctcc
Secondary structure (Cloverleaf model)
>SRA1016461	Lys	TTT
                   c      ACTA aaaaacctcc
                     G - C
                     A - T
                     T - A
                     T - A
                     C - G
                     T + G
                     G - C          T A
                    T     G A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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