The detailed information of tRNA gene sequence


Sequence ID>SRA1016466
Genome IDSRR023846.512513
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 264
End posion on genome 189
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ngcccggaaa
tRNA gene sequence 
GCTCCCATCGTCTAGCGGTCTAGGACGTCGCCCTCTCACGGCGAAAACAGGGGTTCGATT
CCCCTTGGGAGCGCCA
Downstream region at tRNA end position 
gcggcttaag
Secondary structure (Cloverleaf model)
>SRA1016466	Glu	CTC
                   a      GCCA gcggcttaag
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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