The detailed information of tRNA gene sequence


Sequence ID>SRA1016471
Genome IDSRR023846.513916
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 220
End posion on genome 144
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gatcgagatc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCGNACCCCTGATAAGGGTGAGGTCGGTAGTTCGAA
TCTACCCGGGCCCACCA
Downstream region at tRNA end position 
ggcttcgcgt
Secondary structure (Cloverleaf model)
>SRA1016471	Ile	GAT
                   c      ACCA ggcttcgcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    N   G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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