The detailed information of tRNA gene sequence


Sequence ID>SRA1016472
Genome IDSRR023846.514987
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 135
End posion on genome 211
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgcgagtgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
ctatggtgtg
Secondary structure (Cloverleaf model)
>SRA1016472	Ile	GAT
                   c      ACCA ctatggtgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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