The detailed information of tRNA gene sequence


Sequence ID>SRA1016474
Genome IDSRR023846.517298
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 104
End posion on genome 194
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agagcaatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
cccctacctc
Secondary structure (Cloverleaf model)
>SRA1016474	Ser	GGA
                   c      GCCA cccctacctc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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