The detailed information of tRNA gene sequence


Sequence ID>SRA1016477
Genome IDSRR023846.520069
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 18
End posion on genome 93
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcgacccgc
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGCCACAGGTTCGAGC
CCTGTTGCCCCTGCCA
Downstream region at tRNA end position 
gtcttttcaa
Secondary structure (Cloverleaf model)
>SRA1016477	Trp	CCA
                   c      GCCA gtcttttcaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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