The detailed information of tRNA gene sequence


Sequence ID>SRA1016478
Genome IDSRR023846.520450
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 197
End posion on genome 122
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caacgggaat
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGTTCGCATGGCATGCGAAAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
ttctcgttaa
Secondary structure (Cloverleaf model)
>SRA1016478	Ala	GGC
                   t      ACCA ttctcgttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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