The detailed information of tRNA gene sequence


Sequence ID>SRA1016486
Genome IDSRR023846.526333
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 118
End posion on genome 42
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cccctcacgt
tRNA gene sequence 
GCCGCCGTAGCTCAGTTGGTTAGAGCACTAGATTGTGGATCTAGGGGTCCCCCGTTCGAG
CCGGGGCGGTGGTACCA
Downstream region at tRNA end position 
tcgaatttcg
Secondary structure (Cloverleaf model)
>SRA1016486	His	GTG
                   t      ACCA tcgaatttcg
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     G - C          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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