The detailed information of tRNA gene sequence


Sequence ID>SRA1016487
Genome IDSRR023846.526362
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 31
End posion on genome 106
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gctccgacca
tRNA gene sequence 
GCGCCCTTCGTCTAGCGGTCCAGGACGTCGCCCTTTCACGGCGAAAACACGGGTTCGATT
CCCGTAGGGCGCGCCA
Downstream region at tRNA end position 
ttctcggtgc
Secondary structure (Cloverleaf model)
>SRA1016487	Glu	TTC
                   a      GCCA ttctcggtgc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C C A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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