The detailed information of tRNA gene sequence


Sequence ID>SRA1016488
Genome IDSRR023846.526815
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 136
End posion on genome 212
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
cgccggcctt
tRNA gene sequence
CGGAGTGTAGCGCAGTCTGGTAGCGCACCACGTTCGGGACGTGGGGGTCGCAGGTTCAAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position
gctctccccg
Secondary structure (Cloverleaf model)
>SRA1016488	Pro	CGG
                   t      ACCA gctctccccg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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