The detailed information of tRNA gene sequence


Sequence ID>SRA1016492
Genome IDSRR023846.529439
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 89
End posion on genome 165
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gatcgggcac
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGTGGCGCCCTCCGAAGGCGTAGGTCACAGGTTCGAA
TCCTGTCGGGTGCGCCA
Downstream region at tRNA end position 
aatccctcat
Secondary structure (Cloverleaf model)
>SRA1016492	Arg	CCG
                   c      GCCA aatccctcat
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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