The detailed information of tRNA gene sequence


Sequence ID>SRA1016494
Genome IDSRR023846.529544
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 271
End posion on genome 181
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnncttcgc
tRNA gene sequence 
GGAGCGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGAGGGTTAACAGCCC
TCCGCGGGTTCGAATCCCGCCTGCTCCGCCA
Downstream region at tRNA end position 
agtcagtcca
Secondary structure (Cloverleaf model)
>SRA1016494	Ser	GGA
                   c      GCCA agtcagtcca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGAGGGTTAACAGCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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