The detailed information of tRNA gene sequence


Sequence ID>SRA1016528
Genome IDSRR023846.544266
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 80
End posion on genome 154
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaccagtttc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGTAGAGCACACCCTTCACACGGGTGGGGTCACAGGTTCAATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
gatttacgcc
Secondary structure (Cloverleaf model)
>SRA1016528	Val	CAC
                   c      ACCA gatttacgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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