The detailed information of tRNA gene sequence


Sequence ID>SRA1016531
Genome IDSRR023846.545059
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 88
End posion on genome 161
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gatgcgtcgg
tRNA gene sequence 
GCGGGTATAGTACAATGGTAGTACAGCAGCCTTCCAAGCTGAATACACGGGTTCGATTCC
CGTTACCCGCTCCA
Downstream region at tRNA end position 
tttcgctgct
Secondary structure (Cloverleaf model)
>SRA1016531	Gly	TCC
                   g      TCCA tttcgctgct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     T G C C C     A
        A A        A      | | | | |     G
      T     C A T G       A C G G G     C
      G     | | | |                 T T
      G     G T A C
        T A        A     ATAC
                    G   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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